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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795573.1_cds_XP_016444715.1_3894
CDS Infomation

[gene=LOC107769961] [db_xref=GeneID:107769961] [protein=vacuolar amino acid transporter 1-like isoform X2] [protein_id=XP_016444715.1] [location=complement(join(29466..29552,29652..29714,30021..30064,30163..30328,30446..30581,30667..30886,30985..31165,31265..31288,31385..31599,31996..32248))] [gbkey=CDS]
Sequence

ATGAACATGTTCACAGGTGTGACCCCTCCTTCACTCAGCTTTTTAAGGGGTAGCTCCTTC
TTGAGGTCTCAGACTACTCCAACACCTCAACCTTCAATTTGTAAACCTCTAATTTCCTCT
CCGCGCTCAAACAAGGAAGAAGTTCCAACCTTAACACATCCAACAAGGTTATCTGTAGTC
TCTTCTGCAAGATTTTCAGCACTTGAATTGCCACCATCACAGCAGTGTTCCTATACTCAA
TCAGTGCTAAATGCGATAAATGCTCTCTGTGGCATAGGAATACTTTCGACTCCCTATGCA
CTCAAAGAAGGAGGATGGTGTAGCCTTTTCCTGCTGCTACTTTTTGGAATCATTACTTTC
TACACTGGAATTTTGTTAAAAAAATGTTTAGACAGTTCTCCTGGTATTGAAACCTATCCT
GATATCGGACAAGCTGCTTTTGGAATGCTAGGTCGAATATTTATAGCTGTAGCCTTATAC
GCCGAACTATATTCCTCTTGCATCGAGTATTTGATTATGATGAGTGACAATCTTGGTGCA
ATATTCCCAAGTGCTCGCATGGTCTTTGCTGGAATTCATCTGGATTCTTATCAAATGTGT
GCTATCATTTCTACCCTTGTCATACTTCCAACAGTTTGGCTAAGAAACCTCAGTTTGCTG
TCATACATTTCAGCTGGTGGAGTGGTCGCACTGATTGTCGTGGTGCTTTGCTTGTTATGG
GTTGGCGCGATCAATGAAGTTGGATTTCACTCAGGTGGAACAGCTTTAAACATTGCAAAA
TTACCCGTCACAATTGGTCTATACAGTTTTTGCTATGGCAGCCATTCAGTTTTCCCGAAT
ATCTACTCATCAATGAAAGAACCTTCAAGATTTCCTTCTGTTCTTCTTATAAGCTTTTCC
ATCGCCTTCTTTTCGTACTTTGGAGTAGCAGTTTGTGGCTTCCTTATGTTTGGTGAAAAC
ACCAGTCCGCAGTTCACATTGAATTTGCCAGCAAAACTTGTTACTTCAAAAGTTGCAGCC
TGGACAGTGGTTTTAACCCCTGTAACAAAATATGCCATAACAATTACACCAGTCGCGTTT
GGTATTGAAGAATTCTTACCTTCACCTCAGCTTAGAACTTATGGTGTATCGATCCTCATA
AGAACAATTCTGGTGTTTTCAACTTTGGTCATTTCACTAACAGTTCCATATTTTGGTTCT
GTAATGTCATTGATTGGATCTTCACTAGTAATGCTTGTGTCTCTGATCCTTCCTTGTGCA
TGCTACATTAAACTAAGCAAGGATGGAATCACACGATTTCAGCTTGCAGCTTGCACTTCC
ATTATAATGGTGGGAGTAGTTTCTGCTGTTATTGGCACATATTCTGCAGTCACAAGCATG
GCCAACTAG

Peptide Sequence

PEP ID

XP_016444715.1
PEP Infomation

PREDICTED: vacuolar amino acid transporter 1-like isoform X2 [Nicotiana tabacum]
Sequence

MNMFTGVTPPSLSFLRGSSFLRSQTTPTPQPSICKPLISSPRSNKEEVPTLTHPTRLSVV
SSARFSALELPPSQQCSYTQSVLNAINALCGIGILSTPYALKEGGWCSLFLLLLFGIITF
YTGILLKKCLDSSPGIETYPDIGQAAFGMLGRIFIAVALYAELYSSCIEYLIMMSDNLGA
IFPSARMVFAGIHLDSYQMCAIISTLVILPTVWLRNLSLLSYISAGGVVALIVVVLCLLW
VGAINEVGFHSGGTALNIAKLPVTIGLYSFCYGSHSVFPNIYSSMKEPSRFPSVLLISFS
IAFFSYFGVAVCGFLMFGENTSPQFTLNLPAKLVTSKVAAWTVVLTPVTKYAITITPVAF
GIEEFLPSPQLRTYGVSILIRTILVFSTLVISLTVPYFGSVMSLIGSSLVMLVSLILPCA
CYIKLSKDGITRFQLAACTSIIMVGVVSAVIGTYSAVTSMAN

Transcript Sequence

Gene sequence data has not been registered.